Nclustgen’s documentation

Nclustgen is a python tool to generate biclustering and triclustering datasets programmatically.

It wraps two java packages G-Bic, and G-Tric, that serve as backend generators. If you are interested on a GUI version of this generator or on using this generator in a java environment check out those packages.

This tool adds some functionalities to the original packages, for a more fluid interaction with python libraries, like:

• Conversion to numpy arrays

• Conversion to sparse tensors

• Conversion to networkX or dgl n-partite graphs

Source Code

The source code is available at: https://github.com/PedroCotovio/nclustgen.

Getting Started

• Getting Started
  • Installation
  • Basic Usage
    • Biclustering Dataset
    • Triclustering Dataset
• Generating Data
  • Generators
    • Biclustering Generator
    • Triclustering Generator
  • Dense Tensors
    • Matrix
    • Tensor
  • Sparse Tensors
    • Matrix
    • Tensor
  • Graphs

API

• Bicluster Generator
  • Bicluster Generator
  • Bicluster Generator byConfig
• Tricluster Generator
  • Tricluster Generator
  • Tricluster Generator byConfig
• Generator
  • Generator

Indices and tables

• Index

• Module Index

• Search Page